PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009603640.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 259aa    MW: 29460.7 Da    PI: 5.3766
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009603640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.11.5e-14291313112
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknr.atksgyWkatgkd 89 
                      GfrF+Ptd+e +  +L + v+g++++ + +  ++vd+y k ePw++  +   + + e++  y +F+++ kk++ + r +r + ++g+Wk+  kd
  XP_009603640.1  29 EGFRFRPTDSEGL-MFLLRFVAGQEMHDSGFiTTNVDVYgKQEPWEIYdNgvpCGDDEDSTSYrYFITKLKKKS-NARYHRsVGNKGTWKQDAKD 121
                     7**********99.7999999999988878835667*99456*****744555333344444424444444444.5677775888********** PP

             NAM  90 kevlskkgelvglkktLvfykgr 112
                     k+v+ k+              g+
  XP_009603640.1 122 KPVHYKNM-------------GN 131
                     ***99522.............22 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512576127No hitNo description
PROSITE profilePS5100511.94527171IPR003441NAC domain
PfamPF023655.9E-929147IPR003441NAC domain
SuperFamilySSF1019412.09E-1429169IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MRVTRYSTSS EESCVLVQIH GALTTACQEG FRFRPTDSEG LMFLLRFVAG QEMHDSGFIT  60
TNVDVYGKQE PWEIYDNGVP CGDDEDSTSY RYFITKLKKK SNARYHRSVG NKGTWKQDAK  120
DKPVHYKNMG NTSSVKDGHW LMKEYELSKV ILHKFDQNCK DYYVLCAIKK LKHVNSSSET  180
STITTLNNVS DGTDEVTSYV DDLLATNNCK DYYNMCKNLE HSETMAFQES MVMNNSVDKP  240
AEGTTFEMPE LPVPDDXSA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009603640.10.0PREDICTED: protein BEARSKIN1-like
TrEMBLM1D2T53e-62M1D2T5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000799909e-62(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.18e-11NAC domain containing protein 52